Gene fusion preprints

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Preprint Authors Date Reviews & Comments Actions
FirstSV: Fast and Accurate Approach of Structural Variations Detection for Short DNA fragments 15th Sep 2018
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Complementary information on single nucleotide variants, INDELs and functional translocations can be obtained with RNAseq using different library preparations R. Panero...
R. A. Calogero
14th Apr 2018
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DNAJB1-PRKACA fusion kinase drives tumorigenesis and interacts with {beta}-catenin and the liver regenerative response. E. R. Kastenhuber...
S. W. Lowe
Sep 2017
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DNAJB1-PRKACA fusion kinase drives tumorigenesis and interacts with β-catenin and the liver regenerative response. E. R. Kastenhuber...
S. W. Lowe
Sep 2017
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Pan-cancer study of heterogeneous RNA aberrations N. A. Fonseca...
P. Network
Sep 2017
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Precise, pan-cancer discovery of gene fusions reveals a signature of selection in primary tumors D. E. Freeman...
J. Salzman
Aug 2017
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Somatic genome editing with the RCAS/TVA-CRISPR/Cas9 system for precision tumor modeling B. Oldrini...
M. Squatrito
Aug 2017
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Complex rearrangements and oncogene amplifications revealed by long-read DNA and RNA sequencing of a breast cancer cell line M. Nattestad...
M. C. Schatz
Aug 2017
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Computational proteogenomic identification and functional interpretation of translated fusions and micro structural variations in cancer Y. Lin...
S. C. Sahinalp
Jul 2017
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Fusion detection and quantification by pseudoalignment P. Melsted...
L. Pachter
Jul 2017
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RNA-mediated Genomic Arrangements in Mammalian Cells S. K. Gupta...
L. Yen
Jun 2017
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Comprehensive characterization of pediatric acute myeloid leukemia reveals novel molecular features and age-specific interactions H. Bolouri...
S. Meshinchi
Jun 2017
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Comprehensive genome and transcriptome analysis reveals genetic basis for gene fusions in cancer N. A. Fonseca...
Z. Zhang
Jun 2017
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Multi-dimensional genomic analysis of myoepithelial carcinoma identifies prevalent oncogenic gene fusions M. Dalin...
L. G. T. Morris
Jun 2017
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Gene fusion between CDKN1A and RAB44 caused by exon skipping like mechanism due to disruption of a splice site H. Sun...
L. Steinmetz
Mar 2017
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AGFusion: annotate and visualize gene fusions C. Murphy, O. Elemento, Oct 2016
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ChimPipe: Accurate detection of fusion genes and transcription-induced chimeras from RNA-seq data B. R. Martin...
S. Djebali
Aug 2016
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The landscape of gene fusions in hepatocellular carcinoma C. Zhu...
H. Zhao
May 2016
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Comment on “TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions” by Kim et al. A. Dobin, T. R. Gingeras, Nov 2013
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