Genome assembly preprints

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Preprint Authors Date Altmetric Reviews & Comments Actions
Fast and memory-efficient noisy read overlapping with KD-trees D. Parkhomchuk...
A. C. McHardy
21st Jul 2017 10
Review
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Innovative assembly strategy contributes to the understanding of evolution and conservation genetics of the critically endangered Solenodon paradoxus from the island of Hispaniola K. Grigorev...
T. K. Oleksyk
18th Jul 2017 5
Review
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Genomic architecture of codfishes featured by expansions of innate immune genes and short tandem repeats O. K. Tørresen...
S. Jentoft
14th Jul 2017 15
Review
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The genomic architecture of a rapid island radiation: mapping chromosomal rearrangements and recombination rate variation in Laupala T. Blankers...
K. L. Shaw
8th Jul 2017 11
Review
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Completing bacterial genome assemblies with multiplex MinION sequencing R. R. Wick...
K. E. Holt
7th Jul 2017 135
Comments
Review
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riboSeed: leveraging prokaryotic genomic architecture to assemble across ribosomal regions N. R. Waters...
L. Pritchard
5th Jul 2017 16
Review
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Analysis of the Aedes albopictus C6/36 genome provides insight into cell line adaptations to in vitro viral propagation J. R. Miller...
R. S. Shabman
30th Jun 2017 17
Review
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Evaluating Metagenome Assembly on a Simple Defined Community with Many Strain Variants S. Awad...
C. T. Brown
25th Jun 2017 70
Review
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High-quality genome assemblies uncover caste-specific long non-coding RNAs in ants E. J. Shields, R. Bonasio, 24th Jun 2017 17
Review
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Mapping-free variant calling using haplotype reconstruction from k-mer frequencies P. Audano...
F. Vannberg
22nd Jun 2017 37
Review
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The grayling genome reveals selection on gene expression regulation after whole genome duplication S. Varadharajan...
K. S. Jakobsen
22nd Jun 2017 40
Review
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Modeling Biological Problems in Computer Science: A Case Study in Genome Assembly. P. Medvedev 21st Jun 2017 34
Review
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Reference Quality Assembly of the 3.5 Gb genome of Capsicum annuum from a Single Linked-Read Library A. M. Hulse-Kemp...
A. V. Deynze
20th Jun 2017 13
Review
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High-quality de novo genome assembly of the Dekkera bruxellensis UMY321 yeast isolate using Nanopore MinION sequencing T. Fournier...
A. Friedrich
16th Jun 2017 22
Review
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Inferring synteny between genome assemblies: a systematic evaluation D. Liu...
I. J. Tsai
14th Jun 2017 17
Review
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High contiguity Arabidopsis thaliana genome assembly with a single nanopore flow cell T. P. Michael...
J. R. Ecker
14th Jun 2017 150
Review
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BugBuilder - An Automated Microbial Genome Assembly and Analysis Pipeline J. C. Abbott, 11th Jun 2017 27
Review
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Integrating long-range connectivity information into de Bruijn graphs I. Turner...
G. McVean
8th Jun 2017 42
Review
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Haplotype And Repeat Separation In Long Reads G. Tischler, 2nd Jun 2017 2
Review
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A hybrid-hierarchical genome assembly strategy to sequence the invasive golden mussel Limnoperna fortunei M. U. D. Silva...
M. D. F. Rebelo
29th May 2017 NA
Review
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