Linked Reads preprints

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Preprint Authors Date Reviews & Comments Intersect Actions
De novo phased assembly of the Vitis riparia grape genome 18th May 2019
genome_assembly Bookmark
TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools 10th May 2019
genome_assembly Bookmark
First near complete haplotype phased genome assembly of River buffalo (Bubalus bubalis) 28th Apr 2019
bionano genome_assembly Bookmark
Direct Comparative Analysis of 10X Genomics Chromium and Smart-seq2 24th Apr 2019
ncrna rnaseq singlecell_rna_sequencing Bookmark
Comparative performance of the BGI and Illumina sequencing technology for single-cell RNA-sequencing 18th Feb 2019
crispr rnaseq singlecell_rna_sequencing Bookmark
Novel Algorithms for the Taxonomic Classification of Metagenomic Linked Reads 16th Feb 2019
metagenomics Bookmark
Single-cell RNA sequencing of a European and an African lymphoblastoid cell line 14th Feb 2019
rnaseq singlecell_rna_sequencing Bookmark
Comparative analysis of commercially available single-cell RNA sequencing platforms for their performance in complex human tissues 6th Feb 2019
rnaseq singlecell_rna_sequencing Bookmark
scruff: An R/Bioconductor package for preprocessing single-cell RNA-sequencing data 18th Jan 2019
rnaseq singlecell_rna_sequencing Bookmark
Systematic analysis of dark and camouflaged genes: disease-relevant genes hiding in plain sight 10th Jan 2019
nanopore Bookmark
Genome assembly of the A-group Wolbachia in Nasonia oneida and phylogenomic analysis of Wolbachia strains revealed genome evolution and lateral gene transfer 1st Jan 2019
genome_assembly recombination Bookmark
De novo genome assembly of the olive fruit fly (Bactrocera oleae) developed through a combination of linked-reads and long-read technologies Dec 2018
genome_assembly nanopore Bookmark
Direct capture of CRISPR guides enables scalable, multiplexed, and multi-omic Perturb-seq Dec 2018
crispr rnaseq singlecell_rna_sequencing Bookmark
Genome-wide recombination map construction from single individuals using linked-read sequencing Dec 2018
recombination Bookmark
Mutation detection in thousands of acute myeloid leukemia cells using single cell RNA-sequencing Oct 2018
rnaseq singlecell_rna_sequencing Bookmark
A haplotype-resolved draft genome of the European sardine (Sardina pilchardus) B. Louro...
A. V. M. Canario
Oct 2018
Single-cell transcriptome analysis of CD34+ stem cell-derived myeloid cells identifies a CFU-GEMM-like population permissive to human cytomegalovirus infection. Oct 2018
singlecell_rna_sequencing Bookmark
Evaluating the quality of the 1000 genomes project data Aug 2018
Assembly of mbsize genome segments from linked read sequencing of crispr dna targets Aug 2018
crispr Bookmark
New de novo assembly of the Atlantic bottlenose dolphin (Tursiops truncatus) improves genome completeness and provides haplotype phasing. K. A. Martinez-Viaud...
A. Zimin
Aug 2018
genome_assembly Bookmark