Metagenomics intersected with RNA-seq preprints

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Preprint Authors Date Reviews & Comments Intersect Actions
NGOMICS-WF, a Bioinformatic Workflow Tool for Batch Omics Data Analysis 24th Nov 2018
High levels of antibiotic resistance gene expression among birds living in a wastewater treatment plant 7th Nov 2018
antibiotic_resistance Bookmark
GenPipes: an open-source framework for distributed and scalable genomic analyses 2nd Nov 2018
Multi-Method Molecular Characterisation of Human Dust-Mite-associated Allergic Asthma 19th Oct 2018
Characterisation of the faecal virome of captive and wild Tasmanian devils using virus-like particles metagenomics and meta-transcriptomics 16th Oct 2018
MetaMap, an interactive webtool for the exploration of metatranscriptomic reads in human disease-related RNA-seq data 1st Oct 2018
VOLARE: Visual analysis of disease-associated microbiome-immune system interplay 1st Oct 2018
Diversity and composition of cave methanotrophic communities 10th Sep 2018
Normalization methods for microbial abundance data strongly affect correlation estimates 1st Sep 2018
The impact of different sources of heterogeneity on loss of accuracy from genomic prediction models 26th Jul 2018
genomic_prediction Bookmark
Microbial life under ice: metagenome diversity and in situ activity of Verrucomicrobia in seasonally ice-covered lakes P. Tran...
D. Walsh
17th May 2018
Structural variability and functional association in the epiphytic bacteria assemblies of freshwater macrophytes (Myriophyllum spicatum) L. Xian...
F. Liu
8th May 2018
ACDtool: a web-server extending the original Audic-Claverie statistical test to the comparison of large data sets of counts. J. Claverie, T. N. Ta 19th Apr 2018
Changes in the genetic requirements for microbial interactions with increasing community complexity M. Morin, E. C. Pierce, R. J. Dutton 28th Mar 2018
Microbiome-TP53 Gene Interaction in Human Lung Cancer K. L. Greathouse...
C. C. Harris
28th Feb 2018
lung_cancer Bookmark
MetaMap: An atlas of metatranscriptomic reads in human disease-related RNA-seq data L. M. Simon...
F. J. Theis
22nd Feb 2018
GeneQC: A quality control tool for gene expression estimation based on RNA-sequencing reads mapping A. Mcdermaid...
Q. Ma
15th Feb 2018
MicroPheno: Predicting environments and host phenotypes from 16S rRNA gene sequencing using a k-mer based representation of shallow sub-samples E. Asgari...
M. R. K. Mofrad
28th Jan 2018
Bioinformatic analysis of endogenous and exogenous small RNAs on lipoproteins R. M. Allen...
K. C. Vickers
11th Jan 2018
Differential expression analysis of log-ratio transformed counts: benchmarking methods for RNA-Seq data T. Quinn, T. Crowley, M. Richardson Dec 2017