Metagenomics intersected with RNA-seq preprints

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Preprint Authors Date Reviews & Comments Intersect Actions
NGOMICS-WF, a Bioinformatic Workflow Tool for Batch Omics Data Analysis Nov 2018
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High levels of antibiotic resistance gene expression among birds living in a wastewater treatment plant Nov 2018
antibiotic_resistance Bookmark
GenPipes: an open-source framework for distributed and scalable genomic analyses Nov 2018
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Multi-Method Molecular Characterisation of Human Dust-Mite-associated Allergic Asthma Oct 2018
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Characterisation of the faecal virome of captive and wild Tasmanian devils using virus-like particles metagenomics and meta-transcriptomics Oct 2018
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MetaMap, an interactive webtool for the exploration of metatranscriptomic reads in human disease-related RNA-seq data Oct 2018
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VOLARE: Visual analysis of disease-associated microbiome-immune system interplay Oct 2018
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Diversity and composition of cave methanotrophic communities Sep 2018
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Normalization methods for microbial abundance data strongly affect correlation estimates Sep 2018
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The impact of different sources of heterogeneity on loss of accuracy from genomic prediction models Jul 2018
genomic_prediction Bookmark
Microbial life under ice: metagenome diversity and in situ activity of Verrucomicrobia in seasonally ice-covered lakes P. Tran...
D. Walsh
May 2018
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Structural variability and functional association in the epiphytic bacteria assemblies of freshwater macrophytes (Myriophyllum spicatum) L. Xian...
F. Liu
May 2018
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ACDtool: a web-server extending the original Audic-Claverie statistical test to the comparison of large data sets of counts. J. Claverie, T. N. Ta Apr 2018
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Changes in the genetic requirements for microbial interactions with increasing community complexity M. Morin, E. C. Pierce, R. J. Dutton Mar 2018
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Microbiome-TP53 Gene Interaction in Human Lung Cancer K. L. Greathouse...
C. C. Harris
Feb 2018
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MetaMap: An atlas of metatranscriptomic reads in human disease-related RNA-seq data L. M. Simon...
F. J. Theis
Feb 2018
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GeneQC: A quality control tool for gene expression estimation based on RNA-sequencing reads mapping A. Mcdermaid...
Q. Ma
Feb 2018
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MicroPheno: Predicting environments and host phenotypes from 16S rRNA gene sequencing using a k-mer based representation of shallow sub-samples E. Asgari...
M. R. K. Mofrad
Jan 2018
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Bioinformatic analysis of endogenous and exogenous small RNAs on lipoproteins R. M. Allen...
K. C. Vickers
Jan 2018
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Differential expression analysis of log-ratio transformed counts: benchmarking methods for RNA-Seq data T. Quinn, T. Crowley, M. Richardson Dec 2017
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