Nanopore sequencing preprints

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Theme editors: Lachlan Coin , Devika Ganesamoorthy


Preprint Authors Date Reviews & Comments Intersect Actions
Tracking of antibiotic resistance transfer and rapid plasmid evolution in a hospital setting by Nanopore sequencing 18th May 2019
antibiotic_resistance Bookmark
Real-time, MinION-based, amplicon sequencing for lineage typing of infectious bronchitis virus from upper respiratory samples 11th May 2019
streaming Bookmark
Draft Genome Sequence of Candida auris Strain LOM, a Human Clinical Isolate from Greater Metropolitan Houston, Texas 8th May 2019
Bookmark
1D MinION sequencing for large-scale species discovery: 7000 scuttle flies (Diptera: Phoridae) from one site in Kibale National Park (Uganda) revealed to belong to >650 species 30th Apr 2019
Bookmark
Assembly-free single-molecule nanopore sequencing recovers complete virus genomes from natural microbial communities 26th Apr 2019
metagenomics Bookmark
A rapid and accurate MinION-based workflow for tracking species biodiversity in the field 24th Apr 2019
genome_assembly Bookmark
Elav-mediated exon skipping and alternative polyadenylation of the Dscam1 gene is required for axon outgrowth 19th Apr 2019
crispr Bookmark
Pan-genomic and Polymorphic Driven Prediction of Antibiotic Resistance in Elizabethkingia 19th Apr 2019
antibiotic_resistance genome_assembly Bookmark
Multiple Long-read Sequencing Survey of Herpes Simplex Virus Lytic Transcriptome 19th Apr 2019
ncrna rnaseq Bookmark
Targeted Nanopore Sequencing with Cas9 for studies of methylation, structural variants and mutations 19th Apr 2019
methylation Bookmark
Full-coverage sequencing of HIV-1 provirus from a reference plasmid 19th Apr 2019
hiv Bookmark
tailfindr: Alignment-free poly(A) length measurement for Oxford Nanopore RNA and DNA sequencing 26th Mar 2019
rnaseq Bookmark
Shallow metagenomics with Nanopore sequencing in canine fecal microbiota improved bacterial taxonomy and identified an uncultured CrAssphage 22nd Mar 2019
genome_assembly metagenomics Bookmark
Mitigating Pandemic Risk with Influenza A Virus Field Surveillance at a Swine-Human Interface 22nd Mar 2019
Bookmark
Application of cell-free DNA sequencing in characterization of bloodborne microbes and the study of microbe-disease interactions 16th Mar 2019
cell_free_dna metagenomics Bookmark
A beneficial genomic rearrangement creates multiple versions of calcipressin in C. elegans 15th Mar 2019
Bookmark
First hybrid complete genome of Aeromonas veronii reveals chromosome-mediated novel structural variant mcr-3.19 from human clinical specimen 14th Mar 2019
antibiotic_resistance Bookmark
Nanopore sequencing of the pharmacogene CYP2D6 allows simultaneous haplotyping and detection of duplications 14th Mar 2019
Bookmark
Sequencing Complete Genomes of RNA Viruses With MinION Nanopore: Finding Associations Between Mutations 14th Mar 2019
rnaseq Bookmark
Transcriptome profiling of mouse samples using nanopore sequencing of cDNA and RNA molecules 14th Mar 2019
rnaseq Bookmark